Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015933248.1_cds_XP_016479627.1_71151
CDS Infomation

[gene=LOC107800882] [db_xref=GeneID:107800882] [protein=anaphase-promoting complex subunit 8-like] [protein_id=XP_016479627.1] [location=complement(join(13380..13451,13586..14836,17580..17916,17992..18077))] [gbkey=CDS]
Sequence

ATGGGTATCAAAGAAAACTGCAGAAACGAGCTCCGAGCCGCTGTCCGTCAGCTCAACGAC
CGTTGTCTCTACTTTGCCTCCAAATGGGCAGCAGAGCAGTTAGTTGGAATAGAGCAAGAC
CCAACAAAGTATACGCCATCACACACTAGATTCCAGCGTGGCAGCTCCAGCATTCGTCGC
CGGTTCCGTACAGCCACAGAACCTGCTGCTGCTTTCACTTCCACACCGGTGGCCGGTACG
TCCTATGTGGCGACCCCACCAGTGGCACTGGAGGATGATGGCAGCGACGCCGCCATTGAC
AGTGACTTTTACCTGCTTGCTAAGTCCTACTTTGATTGCCGTGAGTACCGGCGTGCAACT
CACGTGCTTCGCGACCAGACTAGCAAAAAAGCTGTCTTCTTGCGGTGTTATGCTCTTTAT
TTGGCTGGGGAAAAGCGAAAAGAAGAAGAGATAATTGAACTTGAGGGTCCCTTAGGCAAA
AGTGATGTTGTGAACAAGGAACTGGTTTCTCTTGAGCGAGAGTTGTCTGCACTTCGCAAA
AATGGAACAATAGACTCCTTCTGTCTTTACTTGTACGGACTTGTTCTTAAGCAGAAAGGC
AGTGACAATCTTGCTAGGTCAGTTCTTGTTGAGTCAGTAAATACCTATCCTTGGAACTGG
AGTGCTTGGTCTGAATTGCAGTCATTGTGCACTACAATTGAGACATTGAAGAGTCTGAAT
CTTGATAACCACTGGATGAAAGACTTCTTCCTAGCCAGTGCTTACCAAGAACTCCGTTTG
CACAATGAATCATTGACAAAATATGAGCACTTGCAAGGAACTTTCAGCTTTAGCAATTAT
GTCCAGGCCCAAATCGCTAAAGCTCAGTACAGCCTGAGAGAATTTGAACAAGTAGAGGTT
ATATTTGAAGAACTTCTAAGAAATGACCCTTACAGAATTGAAGACATGGATATGTATTCC
AATGTGCTGTATGCCAAGGAATGTTGTTCAGCCTTAAGTTATCTTGCACACAGAGTATTC
TTGACTGATAAATACAGGCCAGAGTCTTGTTGCATTGTTGGGAACTATTACAGTTTGAAG
GGGCAGCATGAGAAGTCGGTTATGTATTTTCGGAGGGCTCTCAAATTAAACAAAAATTAT
TTGTCAGCTTGGACACTTATGGGCCATGAGTATGTTGAGATGAAAAACACTCCAGCAGCA
GTTGATGCCTATAGGCGGGCTGTGGACATAAACCCATGTGATTATCGAGCCTGGTATGGA
TTAGGGCAAGCATATGAGATGATGGGAATGCCCTATTATGCCCTTAATTACTTTAAGAAG
TCAGTGTTCTTGCAGCCTAATGATTCTCGGTTATGGATTGCAATGGCCCAATGCTATGAG
ACAGAACAGCTTCATATGCTTGAAGAAGCAATCAAATGTTACAGAAGGGCTGCAAATTGT
AACGATAGAGAAGCTATTGCTCTTCACCAGCTGGCAAAACTGCATGCTGAACTTGACCGT
TCTGATGAAGCAGCATTCTACTACAAGAAGGATTTGGAAAGGATGGAAGCTGAAGAACGA
GAAGGTCCAAACATGGTTGAAGCCTTAATGTTCCTTGCTAGATACTATAAGACTCAAAAG
AGATTTGAAGAAGCAGAGGTTTATTGCACCCGCCTTCTTGATTACTCTGGCCCAGAGAAG
GAAACAGCAAAGAGTCTACTCAGAGGAATAAGATATGAAATGGATGTTGAGCATTTTCCA
CCCTAA

Peptide Sequence

PEP ID

XP_016479627.1
PEP Infomation

PREDICTED: anaphase-promoting complex subunit 8-like [Nicotiana tabacum]
Sequence

MGIKENCRNELRAAVRQLNDRCLYFASKWAAEQLVGIEQDPTKYTPSHTRFQRGSSSIRR
RFRTATEPAAAFTSTPVAGTSYVATPPVALEDDGSDAAIDSDFYLLAKSYFDCREYRRAT
HVLRDQTSKKAVFLRCYALYLAGEKRKEEEIIELEGPLGKSDVVNKELVSLERELSALRK
NGTIDSFCLYLYGLVLKQKGSDNLARSVLVESVNTYPWNWSAWSELQSLCTTIETLKSLN
LDNHWMKDFFLASAYQELRLHNESLTKYEHLQGTFSFSNYVQAQIAKAQYSLREFEQVEV
IFEELLRNDPYRIEDMDMYSNVLYAKECCSALSYLAHRVFLTDKYRPESCCIVGNYYSLK
GQHEKSVMYFRRALKLNKNYLSAWTLMGHEYVEMKNTPAAVDAYRRAVDINPCDYRAWYG
LGQAYEMMGMPYYALNYFKKSVFLQPNDSRLWIAMAQCYETEQLHMLEEAIKCYRRAANC
NDREAIALHQLAKLHAELDRSDEAAFYYKKDLERMEAEEREGPNMVEALMFLARYYKTQK
RFEEAEVYCTRLLDYSGPEKETAKSLLRGIRYEMDVEHFPP

Transcript Sequence

Gene sequence data has not been registered.